Tag: Data science
LV Datathon for Compass and IAI CDT
Student Perspectives: Application of Density Ratio Estimation to Likelihood-Free problems
A post by Jack Simons, PhD student on the Compass programme.
Introduction
I began my PhD with my supervisors, Dr Song Liu and Professor Mark Beaumont with the intention of combining their respective fields of research; Density Ratio Estimation (DRE), and Simulation Based Inference (SBI):
- DRE is a rapidly growing paradigm in machine learning which (broadly) provides efficient methods of comparing densities without the need to compute each density individually. For a comprehensive yet accessible overview of DRE in Machine Learning see [1].
- SBI is a group of methods which seek to solve Bayesian inference problems when the likelihood function is intractable. If you wish for a concise overview of the current work, as well as motivation then I recommend [2].
Last year we released a paper, Variational Likelihood-Free Gradient Descent [3] which combined these fields. This blog post seeks to condense, and make more accessible, the contents of the paper.
Motivation: Likelihood-Free Inference
Let’s begin by introducing likelihood-free inference. We wish to do inference on the posterior distribution of parameters for a specific observation , i.e. we wish to infer which can be decomposed via Bayes’ rule as
The likelihood-free setting is that, additional to the usual intractability of the normalising constant in the denominator, the likelihood, , is also intractable. In lieu of this, we require an implicit likelihood which describes the relation between data and parameters in the form of a forward model/simulator (hence simulation based inference!). (more…)
Compass students attending APTS Week in Durham
Between 4th and 8th of April 2022 Compass CDT students are attending APTS Week 2 in Durham.
Academy for PhD Training in Statistics (APTS) organises, through a collaboration between major UK statistics research groups, four residential weeks of training each year for first-year PhD students in statistics and applied probability nationally. Compass students attend all four APTS courses hosted by prestigious UK Universities.
For their APTS Week in Durham Compass students will be attending the following modules:
- Applied Stochastic Processes (Nicholas Georgiou and Matt Roberts): This module will introduce students to two important notions in stochastic processes — reversibility and martingales — identifying the basic ideas, outlining the main results and giving a flavour of some of the important ways in which these notions are used in statistics.
- Statistical Modelling (Helen Ogden): The aim of this module is to introduce important aspects of statistical modelling, including model selection, various extensions to generalised linear models, and non-linear models.
Compass Guest Lecture: Dr Kamélia Daudel, Postdoctoral researcher Department of Statistics, University of Oxford
New Opportunity: Funded PhD Project on Developing methods for model selection in causal health analyses
How can statistical modelling tell us what causes disease? Electronic Health Records (EHR) have transformed medical research, with diverse examples including examining risks of emergency admissions on weekends vs weekdays, and health and psychological outcomes after COVID-19. The strengths of analyses based on EHR data include the very large number of individuals available for analysis and the extremely detailed data available for each individual.
DataScience@work: British Geological Survey
We’re excited to welcome Dr Kathryn Leeming for our first DataScience@work seminar of the academic year and our first in-person talk for this seminar!
DataScience@work seminar: IBM Research
We’re excited to welcome speakers from IBM Research to the next DataScience@work seminar.